STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86727.1Putative thioredoxin-disulfide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (337 aa)    
Predicted Functional Partners:
CCH86726.1
SAM-dependent methyltransferase; Function of strongly homologous gene; enzyme.
    0.979
CCH86728.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
 
    0.850
trxA
Thioredoxin; Function of strongly homologous gene; carrier; Belongs to the thioredoxin family.
  
 
 0.608
trxA-2
Thioredoxin 1, redox factor; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thioredoxin family.
  
 
 0.608
CCH89901.1
Thioredoxin; Function of strongly homologous gene; carrier.
  
 
 0.497
CCH90667.1
Putative glutathione peroxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the glutathione peroxidase family.
  
  
 0.483
moeB
Molybdopterin-synthase sulfurylase; Function of strongly homologous gene; enzyme.
  
  
 0.471
CCH90013.1
Putative glutaredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.436
gltX
Glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
  
 
 0.408
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.405
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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