STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86730.1Transmembrane efflux protein, EmrB/QacA subfamily; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily. (486 aa)    
Predicted Functional Partners:
CCH86731.1
Putative low-affinity phosphate transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.782
CCH86732.1
Putative phosphate transport regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.774
CCH87527.1
Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
  
     0.731
copC
Copper resistance protein; Function of strongly homologous gene; transporter.
       0.497
CCH86734.1
Homologs of previously reported genes of unknown function.
       0.448
CCH86735.1
Putative Copper chaperone SCO1/SenC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
       0.448
CCH86729.1
Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.427
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.