STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
copCCopper resistance protein; Function of strongly homologous gene; transporter. (572 aa)    
Predicted Functional Partners:
CCH86734.1
Homologs of previously reported genes of unknown function.
 
  
 0.958
CCH85529.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
  
  
 0.898
CCH87390.1
Homologs of previously reported genes of unknown function.
 
  
 0.873
CCH88949.1
Homologs of previously reported genes of unknown function.
   
    0.818
CCH86735.1
Putative Copper chaperone SCO1/SenC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
     0.769
CCH86208.1
Homologs of previously reported genes of unknown function.
  
  
 0.587
CCH88450.1
Homologs of previously reported genes of unknown function.
  
  
 0.587
CCH88480.1
Homologs of previously reported genes of unknown function.
  
  
 0.587
CCH87546.1
Dyp-type peroxidase; Function of strongly homologous gene; enzyme.
  
  
 0.575
CCH86232.1
Putative HAD hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.529
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.