STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86734.1Homologs of previously reported genes of unknown function. (245 aa)    
Predicted Functional Partners:
copC-2
Copper resistance protein CopC; Function of strongly homologous gene; transporter.
 
  
 0.987
copC
Copper resistance protein; Function of strongly homologous gene; transporter.
 
  
 0.948
CCH86735.1
Putative Copper chaperone SCO1/SenC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
       0.790
CCH87043.1
Copper resistance D protein (fragment); Function of strongly homologous gene; transporter.
  
  
 0.676
CCH86618.1
Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.510
CCH88098.1
Transcriptional regulator, MerR family; Function of strongly homologous gene; regulator.
  
     0.453
CCH86730.1
Transmembrane efflux protein, EmrB/QacA subfamily; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily.
       0.448
CCH86731.1
Putative low-affinity phosphate transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.448
CCH86732.1
Putative phosphate transport regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.448
CCH88236.1
Homologs of previously reported genes of unknown function.
  
     0.418
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.