STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86785.1Pyridoxamine 5'-phosphate oxidase-related FMN-binding; Function of strongly homologous gene; enzyme. (131 aa)    
Predicted Functional Partners:
CCH90084.1
F420-dependent oxidoreductase; Function of strongly homologous gene; enzyme.
  
     0.652
cofD
LPPG:FO 2-phospho-L-lactate transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.643
CCH90308.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.634
CCH87404.1
Putative reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.597
CCH86786.1
Anti-sigma regulatory factor, serine/threonine protein kinase; Function of strongly homologous gene; regulator.
       0.518
CCH86787.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
       0.518
CCH86323.1
Homologs of previously reported genes of unknown function.
  
     0.485
CCH86222.1
Homologs of previously reported genes of unknown function.
  
     0.481
CCH86784.1
Flp/Fap pilin component; Function of strongly homologous gene; structure.
       0.445
CCH86807.1
Homologs of previously reported genes of unknown function.
  
     0.432
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.