STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86786.1Anti-sigma regulatory factor, serine/threonine protein kinase; Function of strongly homologous gene; regulator. (360 aa)    
Predicted Functional Partners:
CCH86787.1
Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
 
 0.853
CCH87508.1
Homologs of previously reported genes of unknown function.
  
     0.693
CCH90800.1
Putative Anti-sigma-B factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.661
CCH87004.1
Homologs of previously reported genes of unknown function.
  
     0.577
rsbS
RsbT antagonist protein rsbS; Function of strongly homologous gene; factor.
 
   0.566
CCH85488.1
Homologs of previously reported genes of unknown function.
 
 
 0.547
rsbR
RsbT co-antagonist protein rsbRA; Function of strongly homologous gene; factor.
 
   0.536
CCH86785.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding; Function of strongly homologous gene; enzyme.
       0.518
CCH86724.1
Homologs of previously reported genes of unknown function.
 
   0.504
CCH89648.1
Anti-sigma factor antagonist; Function of strongly homologous gene; factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.501
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.