STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86802.1Homologs of previously reported genes of unknown function. (271 aa)    
Predicted Functional Partners:
CCH86800.1
Homologs of previously reported genes of unknown function.
 
     0.953
CCH86801.1
Homologs of previously reported genes of unknown function.
 
    0.952
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.742
fdhA2
Formate dehydrogenase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.680
cysG
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.635
hemD
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.613
CCH88323.1
Ferredoxin reductase; Function of strongly homologous gene; enzyme.
  
 
 0.572
CCH88416.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function of strongly homologous gene; enzyme.
  
 
 0.572
nasD
Rieske (2Fe-2S) iron-sulphur domain protein; Function of strongly homologous gene; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.572
CCH86364.1
Homologs of previously reported genes of unknown function.
  
     0.539
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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