STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86802.1Homologs of previously reported genes of unknown function. (271 aa)    
Predicted Functional Partners:
CCH86801.1
Homologs of previously reported genes of unknown function.
 
     0.953
CCH86800.1
Homologs of previously reported genes of unknown function.
 
     0.952
cysG
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.674
hemD
Uroporphyrinogen-III C-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.633
CCH88323.1
Ferredoxin reductase; Function of strongly homologous gene; enzyme.
  
 
 0.572
CCH88416.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function of strongly homologous gene; enzyme.
  
 
 0.572
nasD
Rieske (2Fe-2S) iron-sulphur domain protein; Function of strongly homologous gene; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.572
CCH86364.1
Homologs of previously reported genes of unknown function.
  
     0.539
CCH86379.1
Homologs of previously reported genes of unknown function.
  
     0.462
CCH87473.1
Homologs of previously reported genes of unknown function.
 
    0.457
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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