Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH86817.14Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier. (544 aa)    
Predicted Functional Partners:
CCH86818.1
Glycosyl transferase, family 2; Function of strongly homologous gene; enzyme.
 
    0.850
CCH87830.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
 
   0.843
CCH85625.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
 
   0.839
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
    
 0.798
CCH90928.1
Protein of unknown function; No homology to any previously reported sequences.
  
    0.773
CCH88171.1
Homologs of previously reported genes of unknown function.
 
     0.724
korA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; Function of strongly homologous gene; enzyme.
     
  0.714
CCH87746.1
Homologs of previously reported genes of unknown function.
  
     0.700
CCH87124.1
Homologs of previously reported genes of unknown function.
  
     0.690
CCH87876.1
Putative Major facilitator superfamily MFS_1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.665
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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