STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86818.1Glycosyl transferase, family 2; Function of strongly homologous gene; enzyme. (325 aa)    
Predicted Functional Partners:
CCH85872.1
Glycosyl transferase family 2; Function of strongly homologous gene; enzyme.
  
 0.973
CCH86817.1
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier.
 
    0.850
CCH85882.1
Glycosyl transferase family 2; Function of strongly homologous gene; enzyme.
 
 0.801
CCH86766.1
Glycosyl transferase family 2 (modular protein); Function of strongly homologous gene; enzyme.
 
 0.801
CCH85870.1
Serine/threonine protein kinase; Function of strongly homologous gene; regulator.
 
  
 0.782
CCH86651.1
Glycosyl transferase; Function of strongly homologous gene; enzyme.
 
 0.669
CCH87585.1
Sulfotransferase.
 
 
 0.607
CCH85860.1
Putative Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
 
 0.586
CCH86719.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function of strongly homologous gene; receptor.
  
 
 0.586
CCH88635.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.586
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.