STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86819.1Homologs of previously reported genes of unknown function. (406 aa)    
Predicted Functional Partners:
CCH86820.1
Oxidoreductase; Function of strongly homologous gene; enzyme.
 
    0.909
CCH86821.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
 
     0.666
CCH86923.1
Lipolytic protein G-D-S-L family.
  
     0.629
CCH90330.1
Putative Lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.595
CCH86822.1
Permease of the major facilitator superfamily; Function of strongly homologous gene; transporter.
 
    0.506
CCH86817.1
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier.
       0.497
CCH86818.1
Glycosyl transferase, family 2; Function of strongly homologous gene; enzyme.
       0.492
CCH87704.1
Putative xylitol oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.464
tam
Trans-aconitate methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
      
 0.436
CCH90263.1
Integrase, catalytic core; Function of strongly homologous gene; enzyme.
  
     0.403
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.