STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clpSATP-dependent Clp protease adapter protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (98 aa)    
Predicted Functional Partners:
CCH86837.1
Homologs of previously reported genes of unknown function.
 
  
 0.893
CCH86202.1
ATP-dependent Clp protease ATP-binding subunit; Function of strongly homologous gene; enzyme; Belongs to the ClpA/ClpB family.
  
 
 0.718
CCH86657.1
Putative ATP-dependent Clp protease ATP-binding subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.718
CCH87155.1
Clp domain protein; Function of strongly homologous gene; enzyme.
  
 
 0.718
clpC
Negative regulator of genetic competence ClpC/MecB; Function of strongly homologous gene; regulator; Belongs to the ClpA/ClpB family.
  
 
 0.718
clpB
Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.718
CCH86262.1
Homologs of previously reported genes of unknown function.
  
 
 0.695
CCH86263.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
 0.695
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
     
 0.686
pncA
Nicotinamidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.664
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.