STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86842.1Phosphatase; Function of strongly homologous gene; enzyme. (222 aa)    
Predicted Functional Partners:
CCH85691.1
Phosphatase; Function of strongly homologous gene; enzyme.
  
  
 
0.918
mtlA
PTS system mannitol-specific EIICBA component [Includes: Mannitol permease IIC component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
  0.908
cysM
Cysteine synthase B; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.773
racE
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.741
moaD
Molybdopterin synthase subunit MoaD; Function of strongly homologous gene; enzyme.
       0.625
MODMU_3275
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
 
    0.599
CCH86844.1
Putative Metal-dependent hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.541
CCH86839.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.439
CCH88086.1
Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.427
CCH88085.1
Putative glycosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.