STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86872.1Putative anti-sigma regulatory factor, serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (316 aa)    
Predicted Functional Partners:
CCH90800.1
Putative Anti-sigma-B factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.684
CCH86724.1
Homologs of previously reported genes of unknown function.
 
   0.635
CCH87004.1
Homologs of previously reported genes of unknown function.
  
     0.620
CCH87508.1
Homologs of previously reported genes of unknown function.
  
     0.612
CCH86874.1
Methyltransferase type 11, S-adenosyl-L-methionine-dependent; Function of strongly homologous gene; enzyme.
 
     0.552
CCH90896.1
Homologs of previously reported genes of unknown function.
  
     0.534
CCH89375.1
Amidohydrolase; Function of strongly homologous gene; enzyme.
  
     0.533
CCH86873.1
Methylenetetrahydrofolate reductase; Function of strongly homologous gene; enzyme.
       0.532
CCH90380.1
Putative Predicted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.529
CCH87506.1
Anti-anti-sigma factor; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.512
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.