STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86880.1Proline dehydrogenase; Function of strongly homologous gene; enzyme. (310 aa)    
Predicted Functional Partners:
CCH86881.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Function of strongly homologous gene; enzyme.
 0.998
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.966
ald-2
Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
 
 
 0.932
CCH88351.1
Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
 
 
 0.931
CCH87792.1
Methylmalonate-semialdehyde dehydrogenase; Function of strongly homologous gene; enzyme.
 
 
 0.923
CCH89662.1
Aldehyde dehydrogenase [NAD+]; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
 
 
 0.908
gabD1
Succinate-semialdehyde dehydrogenase [NADP+]; Function of strongly homologous gene; enzyme.
 
 
 0.904
pip
Proline iminopeptidase; Function of strongly homologous gene; enzyme; Belongs to the peptidase S33 family.
     
  0.900
pip-2
Proline iminopeptidase; Function of strongly homologous gene; enzyme; Belongs to the peptidase S33 family.
     
  0.900
pip-3
Proline iminopeptidase; Function of strongly homologous gene; enzyme.
     
  0.900
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.