STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86897.1Methylcrotonoyl-CoA carboxylase; Function of strongly homologous gene; enzyme. (537 aa)    
Predicted Functional Partners:
CCH86900.1
Acetyl/propionyl-CoA carboxylase, alpha subunit; Function of strongly homologous gene; enzyme.
 0.998
accC
Carbamoyl-phosphate synthase L chain ATP-binding protein; Function of strongly homologous gene; enzyme.
 
 0.988
bccA
Acetyl-/propionyl-coenzyme A carboxylase alpha chain [Biotin carboxylase; Function of strongly homologous gene; enzyme.
 
 0.980
fadB-2
Enoyl-CoA hydratase/carnithine racemase; Function of strongly homologous gene; enzyme.
 0.940
CCH89626.1
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.937
CCH90837.1
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.934
CCH86529.1
Enoyl-CoA hydratase/isomerase; Function of strongly homologous gene; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.921
caiD
Carnitinyl-CoA dehydratase; Function of strongly homologous gene; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.921
CCH90462.1
Putative enoyl-CoA hydratase echA14; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.919
pyc-2
Pyruvate carboxylase (fragment); Function of strongly homologous gene; enzyme.
  
 
 0.769
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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