Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH86937.1ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter. (257 aa)    
Predicted Functional Partners:
CCH86938.1
ABC transporter, permease protein; Function of strongly homologous gene; transporter.
 0.991
CCH89558.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Function of strongly homologous gene; transporter.
 0.974
CCH86244.1
ABC-type proline/glycine betaine transport permease; Function of strongly homologous gene; transporter.
 0.968
CCH86940.1
Homologs of previously reported genes of unknown function.
 
 0.964
CCH86268.1
Homologs of previously reported genes of unknown function.
 
 0.948
CCH89557.1
ABC-type nitrate/sulfonate/bicarbonate transport system, extracellular component; Function of strongly homologous gene; transporter.
 
 0.924
CCH89325.1
Homologs of previously reported genes of unknown function.
  
 0.803
fdhA2
Formate dehydrogenase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.801
codA
Cytosine deaminase; Function of strongly homologous gene; enzyme.
 
     0.777
CCH87582.1
NADPH-dependent fmn reductase.
 
 
 0.777
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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