STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH86939.1Monoxygenase; Function of strongly homologous gene; enzyme. (448 aa)    
Predicted Functional Partners:
CCH87582.1
NADPH-dependent fmn reductase.
 
 0.785
CCH86938.1
ABC transporter, permease protein; Function of strongly homologous gene; transporter.
 
 
 0.777
CCH86937.1
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
  
 
 0.653
CCH86940.1
Homologs of previously reported genes of unknown function.
  
 
 0.588
CCH87556.1
NADPH-dependent FMN reductase; Function of strongly homologous gene; enzyme.
 
 0.584
pobB
Phenoxybenzoate dioxygenase subunit beta; Function of strongly homologous gene; enzyme.
 
 
 0.515
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
 
 
 0.496
tauD
Alpha-ketoglutarate-dependent taurine dioxygenase (fragment); Function of strongly homologous gene; enzyme.
 
 
 0.494
CCH89557.1
ABC-type nitrate/sulfonate/bicarbonate transport system, extracellular component; Function of strongly homologous gene; transporter.
 
 
 0.472
CCH87404.1
Putative reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.445
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.