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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86939.1Monoxygenase; Function of strongly homologous gene; enzyme. (448 aa)    
Predicted Functional Partners:
CCH87582.1
NADPH-dependent fmn reductase.
 
   0.761
CCH86938.1
ABC transporter, permease protein; Function of strongly homologous gene; transporter.
 
    0.748
CCH86937.1
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
  
 0.625
CCH86940.1
Homologs of previously reported genes of unknown function.
  
  
 0.552
CCH87556.1
NADPH-dependent FMN reductase; Function of strongly homologous gene; enzyme.
 
   0.529
pobB
Phenoxybenzoate dioxygenase subunit beta; Function of strongly homologous gene; enzyme.
 
  
 0.447
CCH87404.1
Putative reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.439
CCH88283.1
X-Pro dipeptidyl-peptidase, C-terminal domain; Function of strongly homologous gene; enzyme.
  
     0.429
CCH86222.1
Homologs of previously reported genes of unknown function.
  
    0.411
tauD
Alpha-ketoglutarate-dependent taurine dioxygenase (fragment); Function of strongly homologous gene; enzyme.
 
  
 0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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