STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CCH86953.1Putative FAD linked oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (455 aa)    
Predicted Functional Partners:
CCH86954.1
Putative Glyoxalase/bleomycin resistance protein/dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.768
CCH86948.1
Putative creatinine amidohydrolase (Creatininase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     0.752
glcE
Glycolate oxidase FAD binding subunit; Function of strongly homologous gene; enzyme.
  
  
  0.713
glcF
Glycolate oxidase iron-sulfur subunit; Function of strongly homologous gene; enzyme.
 
 
 0.693
CCH86268.1
Homologs of previously reported genes of unknown function.
 
     0.668
CCH86940.1
Homologs of previously reported genes of unknown function.
 
     0.655
CCH86955.1
Peptidase S1; Function of strongly homologous gene; enzyme.
   
  0.651
korA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; Function of strongly homologous gene; enzyme.
    
 0.607
sucA
2-oxoglutarate decarboxylase; Function of strongly homologous gene; enzyme.
  
 
 0.602
CCH86951.1
Homologs of previously reported genes of unknown function.
 
     0.561
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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