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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86956.1Homologs of previously reported genes of unknown function. (221 aa)    
Predicted Functional Partners:
CCH86958.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
  
    0.589
etfB
Electron transfer flavoprotein subunit beta; Function of strongly homologous gene; carrier.
  
 
 0.555
CCH86959.1
Putative Alpha/beta hydrolase fold; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.482
CCH86955.1
Peptidase S1; Function of strongly homologous gene; enzyme.
  
    0.450
CCH86211.1
Transcriptional regulator, CarD family; Function of strongly homologous gene; regulator.
   
    0.400
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.