STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH86984.1ABC-type cobalt transport system, ATPase component; Function of strongly homologous gene; enzyme. (246 aa)    
Predicted Functional Partners:
CCH86983.1
Cobalt transport protein (modular protein); Function of strongly homologous gene; transporter.
 
 0.999
CCH86985.1
ABC transporter; Function of strongly homologous gene; transporter.
 
 
 0.998
CCH85558.1
HMP/thiamine permease; Function of strongly homologous gene; transporter.
 
 0.971
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Function of strongly homologous gene; transporter.
 
 
 0.888
cbiM
Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 
 0.783
CCH86982.1
Conserved protein of unknown function, putative MOSC domain; Homologs of previously reported genes of unknown function.
  
    0.782
cobIJ
Cobalamin biosynthesis protein cobIJ [Includes: Precorrin-2 C(20)-methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.709
CCH88397.1
Oligopeptide transporter subunit; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
 
0.694
CCH86305.1
ABC transporter; Function of strongly homologous gene; transporter.
 
   
0.639
CCH87621.1
ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
     
0.627
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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