STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87010.1Histidine kinase; Function of strongly homologous gene; enzyme. (439 aa)    
Predicted Functional Partners:
CCH87009.1
Two-component system response regulator (fragment); Function of strongly homologous gene; regulator.
 
 0.961
CCH87008.1
LuxR family two-component system transcriptional regulator (fragment); Function of strongly homologous gene; regulator.
 
 
 0.939
pspC
Phage shock protein C, PspC; Function of strongly homologous gene; cell process.
  
  
 0.737
CCH85690.1
Two component integral membrane signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
  
     0.721
CCH85689.1
Two-component signal transduction response regulator; Function of strongly homologous gene; regulator.
 
 
 0.709
CCH85620.1
Two component transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator.
 
 
 0.702
CCH88082.1
Two component transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator.
 
 
 0.702
yxjL
Uncharacterized transcriptional regulatory protein yxjL.
 
 
 0.695
CCH89619.1
Function of strongly homologous gene; receptor.
 
 
 0.694
CCH88307.1
Two component transcriptional regulator, LuxR family (fragment); Function of strongly homologous gene; regulator.
 
 
 0.678
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.