STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87042.1Putative Glycosyl hydrolase, BNR repeat-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (320 aa)    
Predicted Functional Partners:
pmtA
Phosphatidylethanolamine N-methyltransferase; Function of strongly homologous gene; enzyme.
 
     0.615
CCH87043.1
Copper resistance D protein (fragment); Function of strongly homologous gene; transporter.
       0.539
phoR
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
       0.516
CCH87330.1
Putative Xaa-Pro aminopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.510
phoB
Two component phosphate regulon transcriptional regulatory protein phoB; Function of strongly homologous gene; regulator.
       0.422
CCH87053.1
Homologs of previously reported genes of unknown function.
 
     0.408
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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