STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actP-2Copper-transporting P-type ATPase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (789 aa)    
Predicted Functional Partners:
CCH87061.1
Copper chaperone (modular protein); Function of strongly homologous gene; structure.
 
 
 0.874
copZ
Copper insertion chaperone and transporter component; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
 
 0.771
CCH87062.1
Homologs of previously reported genes of unknown function.
       0.615
csoR
Copper-sensing transcriptional repressor csoR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  
 0.609
nuoA
NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.
     
 0.509
CCH87065.1
Putative NADH:ubiquinone oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.489
nuoH
NADH-quinone oxidoreductase subunit H; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.447
nuoJ
NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
       0.412
nuoK
NADH-quinone oxidoreductase subunit K; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.403
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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