STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87115.1Homologs of previously reported genes of unknown function. (228 aa)    
Predicted Functional Partners:
CCH87116.1
Homologs of previously reported genes of unknown function.
 
    0.954
CCH87114.1
Homologs of previously reported genes of unknown function.
 
     0.950
CCH87118.1
Type II secretion system F domain protein; Function of strongly homologous gene; cell process.
 
 
  0.938
CCH87119.1
Flp pilus assembly protein TadC; Function of strongly homologous gene; cell process.
 
 
  0.937
CCH87121.1
TadE-like protein; Function of strongly homologous gene; cell process.
 
    0.881
CCH87122.1
TadE-like protein; Function of strongly homologous gene; cell process.
 
    0.872
CCH87117.1
Flp pilus assembly protein, ATPase CpaF; Function of strongly homologous gene; cell process.
 
 
  0.868
CCH87123.1
Homologs of previously reported genes of unknown function.
 
     0.862
CCH87124.1
Homologs of previously reported genes of unknown function.
 
     0.855
CCH89224.1
Homologs of previously reported genes of unknown function.
 
  
 0.842
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.