STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87124.1Homologs of previously reported genes of unknown function. (1073 aa)    
Predicted Functional Partners:
CCH87123.1
Homologs of previously reported genes of unknown function.
 
     0.936
CCH87122.1
TadE-like protein; Function of strongly homologous gene; cell process.
 
     0.935
CCH87121.1
TadE-like protein; Function of strongly homologous gene; cell process.
 
     0.922
CCH87118.1
Type II secretion system F domain protein; Function of strongly homologous gene; cell process.
 
     0.871
CCH87119.1
Flp pilus assembly protein TadC; Function of strongly homologous gene; cell process.
 
     0.862
CCH87115.1
Homologs of previously reported genes of unknown function.
 
     0.859
CCH87114.1
Homologs of previously reported genes of unknown function.
 
     0.854
CCH87116.1
Homologs of previously reported genes of unknown function.
 
     0.848
CCH87130.1
Homologs of previously reported genes of unknown function.
 
     0.808
CCH87131.1
Homologs of previously reported genes of unknown function.
 
     0.797
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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