Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH87177.1Competence protein ComEA-like protein with helix-hairpin-helix repeat region; Function of strongly homologous gene; cell process. (299 aa)    
Predicted Functional Partners:
CCH87178.1
ComEC/Rec2-related protein (modular protein); Function of strongly homologous gene; cell process.
 
  
 0.931
CCH87179.1
DNA polymerase III, delta subunit; Function of strongly homologous gene; enzyme.
       0.824
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
     0.740
CCH87176.1
Homologs of previously reported genes of unknown function.
 
     0.693
rsfS
Conserved protein of unknown function; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.631
gpm
Phosphoglycerate mutase; Function of strongly homologous gene; enzyme.
       0.631
CCH87005.1
Putative GCN5-related N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.562
CCH90818.1
Putative N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.562
CCH90102.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator.
 
     0.549
pknB
Two component serine/threonine-protein kinase with PASTA sensor; Function of strongly homologous gene; enzyme.
 
   
 0.513
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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