Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH87193.1ABC transporter, ATP-binding; Function of strongly homologous gene; transporter. (300 aa)    
Predicted Functional Partners:
CCH90587.1
Putative metal ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.980
CCH87194.1
ABC transporter; Function of strongly homologous gene; transporter.
 
     0.944
CCH89252.1
ABC transporter; Function of strongly homologous gene; transporter.
   
0.920
CCH87878.1
ABC-type metal ion transport system; Function of strongly homologous gene; transporter.
  
 
 0.910
CCH87196.1
Two-component system, NarL family, response regulator DesR; Function of strongly homologous gene; regulator.
 
     0.779
CCH87195.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; regulator.
 
     0.748
ideR
Iron-dependent repressor ideR; Function of strongly homologous gene; regulator.
 
 
 0.550
recQ-2
ATP-dependent DNA helicase RecQ; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.543
dnaJ
Chaperone Hsp40, co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interaction [...]
  
 
 
 0.482
CCH87107.1
Nod factor export ATP-binding protein I (fragment).
 
    0.479
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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