STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87203.1Methyl-accepting chemotaxis sensory transducer; Function of strongly homologous gene; receptor. (519 aa)    
Predicted Functional Partners:
CCH90892.1
Chemotaxis protein histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.980
cheW
Chemotaxis signal transduction protein; Function of strongly homologous gene; regulator.
 
 0.972
cheB
Chemotaxis response regulator protein CheB-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.963
cheR
Chemotaxis protein methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.959
cheY-2
Chemotaxis protein cheY; Function of strongly homologous gene; regulator.
 
 0.955
cheY
Chemotaxis protein cheY, Signal transduction response regulator, receiver region; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.953
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.915
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
  
 0.901
CCH88635.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.874
CCH85554.1
Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme.
 
 0.841
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.