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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhoHPhosphate starvation-inducible protein; Function of strongly homologous gene; transporter. (374 aa)    
Predicted Functional Partners:
ybeY
Putative metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
  
 0.994
CCH87207.1
Homologs of previously reported genes of unknown function.
  
    0.865
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.860
CCH87208.1
Cytidine deaminase; Function of strongly homologous gene; enzyme.
  
    0.782
phoU
Negative regulator of PhoR/PhoB two-component regulator; Plays a role in the regulation of phosphate uptake.
 
   
 0.698
phoR-2
Two-component Pi level signal transduction regulator, system with PhoB; Function of strongly homologous gene; enzyme.
 
  
 0.681
era
Membrane-associated, 16S rRNA-binding GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
  
 0.677
CCH87204.1
Histidine triad nucleotide-binding protein; Function of strongly homologous gene; cell process.
       0.657
phoR
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
  
  
 0.623
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
     0.615
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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