STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PhoHPhosphate starvation-inducible protein; Function of strongly homologous gene; transporter. (374 aa)    
Predicted Functional Partners:
ybeY
Putative metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
  
 0.995
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.894
CCH87207.1
Homologs of previously reported genes of unknown function.
  
  
 0.872
CCH87208.1
Cytidine deaminase; Function of strongly homologous gene; enzyme.
  
  
 0.747
phoU
Negative regulator of PhoR/PhoB two-component regulator; Plays a role in the regulation of phosphate uptake.
 
  
 0.720
era
Membrane-associated, 16S rRNA-binding GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
  
 0.697
phoR-2
Two-component Pi level signal transduction regulator, system with PhoB; Function of strongly homologous gene; enzyme.
 
  
 0.669
CCH87204.1
Histidine triad nucleotide-binding protein; Function of strongly homologous gene; cell process.
       0.664
CCH85541.1
Competence/damage-inducible CinA-like protein; Function of strongly homologous gene; cell process; Belongs to the CinA family.
 
     0.642
phoB-2
Two-component Pi uptake response regulator, system with PhoR (OmpR family); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   
 0.640
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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