STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87231.1Adenylyl cyclase; Function of strongly homologous gene; enzyme. (444 aa)    
Predicted Functional Partners:
CCH89435.1
Two-component sensor histidine kinase; Function of strongly homologous gene; enzyme.
  
 0.917
CCH85641.1
Homologs of previously reported genes of unknown function.
  
 0.787
CCH87526.1
Homologs of previously reported genes of unknown function.
  
 0.787
CCH87488.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.764
CCH88979.1
Putative ATP/GTP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 0.733
CCH85554.1
Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme.
  
 0.731
CCH85780.1
Serine phosphatase RsbU, regulator of sigma subunit (modular protein); Function of strongly homologous gene; enzyme.
  
 0.731
CCH88547.1
Two component sensory transduction histidine kinase with PAS/PAC sensory domains (fragment); Function of strongly homologous gene; enzyme.
  
 0.731
CCH89654.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.731
CCH90899.1
Putative PAS/PAC light sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
 0.731
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.