STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87241.1Homologs of previously reported genes of unknown function. (198 aa)    
Predicted Functional Partners:
CCH89136.1
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.726
CCH88531.1
Homologs of previously reported genes of unknown function.
  
     0.721
CCH89216.1
Putative LysM domain peptidoglycan-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
     0.640
CCH88549.1
Putative LysM domain peptidoglycan-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
  
     0.634
CCH88530.1
Homologs of previously reported genes of unknown function.
  
     0.629
CCH89134.1
Homologs of previously reported genes of unknown function.
  
     0.625
CCH88529.1
Homologs of previously reported genes of unknown function.
  
     0.624
CCH87131.1
Homologs of previously reported genes of unknown function.
  
     0.620
CCH89135.1
Homologs of previously reported genes of unknown function.
  
     0.617
CCH88524.1
Putative conjugative transfer gene complex protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
     0.590
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.