STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87296.1Homologs of previously reported genes of unknown function. (149 aa)    
Predicted Functional Partners:
CCH86116.1
Conserved protein of unknown function, putative Tetratricopeptide domain; Homologs of previously reported genes of unknown function.
 
 
 
 0.732
CCH87297.1
Putative rhodanese; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.611
ftsX
Cell division protein ftsX homolog; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.597
CCH90198.1
2'-5' RNA ligase; Function of strongly homologous gene; enzyme.
  
     0.561
CCH89328.1
Homologs of previously reported genes of unknown function.
  
     0.538
CCH89724.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.479
CCH90385.1
DNA binding domain protein, excisionase family; Function of strongly homologous gene; enzyme.
 
     0.448
CCH88858.1
YGGT family protein; Homologs of previously reported genes of unknown function.
 
 
   0.446
CCH87472.1
DNA binding domain protein, excisionase family; Function of strongly homologous gene; enzyme.
 
     0.433
CCH89683.1
Phosphoesterase PA-phosphatase; Function of strongly homologous gene; enzyme.
 
     0.427
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.