STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87306.1Na+:solute symporter; Function of strongly homologous gene; transporter. (115 aa)    
Predicted Functional Partners:
CCH87305.1
Na+:solute symporter; Function of strongly homologous gene; transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.993
CCH87304.1
Protein of unknown function; No homology to any previously reported sequences.
 
     0.950
CCH86880.1
Proline dehydrogenase; Function of strongly homologous gene; enzyme.
  
  
 0.726
CCH87303.1
Homologs of previously reported genes of unknown function.
       0.586
gpmB
Phosphoglycerate mutase; Function of strongly homologous gene; enzyme.
  
    0.575
CCH87307.1
Homologs of previously reported genes of unknown function.
       0.567
CCH86153.1
PRPP-binding protein, adenine/guanine phosphoribosyltransferase; Function of strongly homologous gene; enzyme.
  
  
 0.500
CCH86600.1
Polyketide cyclase; Function of strongly homologous gene; enzyme.
  
     0.455
CCH87227.1
Homologs of previously reported genes of unknown function.
  
     0.438
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.435
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.