STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87312.1Homologs of previously reported genes of unknown function. (121 aa)    
Predicted Functional Partners:
CCH87311.1
Permease; Function of strongly homologous gene; transporter.
       0.568
arsB
Arsenical permease; Function of strongly homologous gene; transporter.
       0.553
CCH87480.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.475
CCH89294.1
Peptidoglycan-binding lysin domain protein (modular protein); Function of strongly homologous gene; cell process.
  
     0.449
CCH90617.1
Homologs of previously reported genes of unknown function.
 
     0.428
CCH85546.1
Homologs of previously reported genes of unknown function.
 
     0.426
CCH90870.1
Homologs of previously reported genes of unknown function; Belongs to the UPF0246 family.
 
     0.406
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.