STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87333.1F420-dependent NADP reductase; Function of strongly homologous gene; enzyme. (225 aa)    
Predicted Functional Partners:
CCH90084.1
F420-dependent oxidoreductase; Function of strongly homologous gene; enzyme.
 
     0.709
cofD
LPPG:FO 2-phospho-L-lactate transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.657
CCH87332.1
Conserved protein of unknown function;putative coiled-coil domain; Homologs of previously reported genes of unknown function.
       0.645
fbiC
FO synthase, 7, 8-didemethyl-8-hydroxy-5-deazariboflavin synthase; Function of strongly homologous gene; enzyme.
 
   
 0.490
CCH90308.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.445
CCH89955.1
Peptidase S26A, superoxide dismutase maturation protease, nickel-type; Function of strongly homologous gene; enzyme.
  
     0.424
CCH90814.1
Putative 5,10-methylenetetrahydromethanopterin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.409
CCH89952.1
Homologs of previously reported genes of unknown function.
  
     0.402
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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