STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87343.1Homologs of previously reported genes of unknown function. (423 aa)    
Predicted Functional Partners:
CCH87942.1
Homologs of previously reported genes of unknown function.
  
 
 0.827
CCH85625.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
 
 0.729
CCH87830.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
 
 0.729
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit; Function of strongly homologous gene; enzyme.
  
 
 0.729
CCH87379.1
Blue (Type 1) copper domain protein; Function of strongly homologous gene; carrier.
   
   0.718
CCH87342.1
Homologs of previously reported genes of unknown function.
 
     0.588
CCH86363.1
Homologs of previously reported genes of unknown function.
   
 
 0.544
glnE
Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]
     
 0.488
CCH89013.1
Homologs of previously reported genes of unknown function.
 
    0.466
CCH87341.1
FMN-binding negative transcriptional regulator; Function of strongly homologous gene; factor.
       0.460
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.