STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH87345.1Methyl-accepting chemotaxis sensory transducer; Function of strongly homologous gene; cell process. (518 aa)    
Predicted Functional Partners:
CCH90892.1
Chemotaxis protein histidine kinase; Function of strongly homologous gene; enzyme.
 
 0.949
cheW
Chemotaxis signal transduction protein; Function of strongly homologous gene; regulator.
 
 0.935
cheB
Chemotaxis response regulator protein CheB-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.910
cheR
Chemotaxis protein methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.902
cheY-2
Chemotaxis protein cheY; Function of strongly homologous gene; regulator.
 
 0.893
cheY
Chemotaxis protein cheY, Signal transduction response regulator, receiver region; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.888
CCH85755.1
Chemotaxis CheW protein, Positive regulator of CheA protein activity; Function of strongly homologous gene; regulator.
 
 0.668
CCH89235.1
Chemotaxis CheW protein; Function of strongly homologous gene; cell process.
 
 0.667
CCH88635.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 0.660
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.624
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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