STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbTSwitch protein/serine-threonine kinase; Function of strongly homologous gene; enzyme; Belongs to the sigma-70 factor family. ECF subfamily. (359 aa)    
Predicted Functional Partners:
rsbR
RsbT co-antagonist protein rsbRA; Function of strongly homologous gene; factor.
 
 
 0.984
rsbS
RsbT antagonist protein rsbS; Function of strongly homologous gene; factor.
 
 
 0.977
CCH87355.1
Protein of unknown function; No homology to any previously reported sequences.
       0.783
pknB
Two component serine/threonine-protein kinase with PASTA sensor; Function of strongly homologous gene; enzyme.
    
 
 0.727
spk
Two-component serine/threonine-protein kinase PK-1; Function of strongly homologous gene; enzyme.
    
 
 0.727
CCH90800.1
Putative Anti-sigma-B factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.634
CCH89957.1
Putative magnesium or manganese-dependent protein phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   0.613
CCH89648.1
Anti-sigma factor antagonist; Function of strongly homologous gene; factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.600
CCH87506.1
Anti-anti-sigma factor; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.598
CCH87351.1
Protein of unknown function; No homology to any previously reported sequences.
       0.584
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.