STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87379.1Blue (Type 1) copper domain protein; Function of strongly homologous gene; carrier. (150 aa)    
Predicted Functional Partners:
CCH86250.1
Multicopper oxidase, type 3; Function of strongly homologous gene; enzyme.
   
 
 0.811
CCH87343.1
Homologs of previously reported genes of unknown function.
   
   0.718
CCH88002.1
Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
   
   0.718
CCH90604.1
Two component signal transduction tyrosine/serine phosphatase; Function of strongly homologous gene; enzyme.
   
 
 0.628
CCH87377.1
Transcriptional regulator, CopY family; Function of strongly homologous gene; factor.
       0.584
CCH87378.1
Zn-dependent protease; Function of strongly homologous gene; enzyme.
       0.584
CCH87114.1
Homologs of previously reported genes of unknown function.
   
 
 0.551
CCH88561.1
Homologs of previously reported genes of unknown function.
   
 
 0.551
CCH89226.1
Homologs of previously reported genes of unknown function.
   
 
 0.551
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.