STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87382.1Transcriptional regulator, ArsR family; Function of strongly homologous gene; regulator. (109 aa)    
Predicted Functional Partners:
CCH87381.1
Putative Co/Zn/Cd cation transporter-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
   
 0.911
czcD-2
Cobalt-zinc-cadmium resistance protein czcD; Function of strongly homologous gene; transporter.
     
 0.708
senC
Electron transport protein; Function of strongly homologous gene; carrier.
  
    0.632
CCH87394.1
Cobalt, cadmium, and zinc/H(+)-K(+) antiporter; Function of strongly homologous gene; transporter.
 
   
 0.566
CCH87100.1
Cadmium resistance transporter; Function of strongly homologous gene; transporter.
 
  
 0.492
CCH87384.1
Cytochrome c biogenesis protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     
 0.480
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.