Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH87390.1Homologs of previously reported genes of unknown function. (243 aa)    
Predicted Functional Partners:
copC-2
Copper resistance protein CopC; Function of strongly homologous gene; transporter.
 
  
 0.991
copC
Copper resistance protein; Function of strongly homologous gene; transporter.
 
  
 0.873
CCH87043.1
Copper resistance D protein (fragment); Function of strongly homologous gene; transporter.
  
  
 0.738
CCH87391.1
Homologs of previously reported genes of unknown function.
       0.644
CCH87389.1
Homologs of previously reported genes of unknown function.
 
     0.571
CCH88091.1
Homologs of previously reported genes of unknown function.
  
     0.550
CCH88238.1
Diacylglycerol kinase; Function of strongly homologous gene; enzyme.
  
     0.482
CCH87393.1
Transcriptional regulator, ArsR family; Function of strongly homologous gene; regulator.
       0.479
CCH87394.1
Cobalt, cadmium, and zinc/H(+)-K(+) antiporter; Function of strongly homologous gene; transporter.
       0.479
CCH87388.1
Transcriptional regulator, MerR family; Function of strongly homologous gene; factor.
       0.447
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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