Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
copC-2Copper resistance protein CopC; Function of strongly homologous gene; transporter. (591 aa)    
Predicted Functional Partners:
CCH87390.1
Homologs of previously reported genes of unknown function.
 
  
 0.991
CCH86734.1
Homologs of previously reported genes of unknown function.
 
  
 0.979
CCH87391.1
Homologs of previously reported genes of unknown function.
 
     0.855
CCH85529.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.779
CCH87546.1
Dyp-type peroxidase; Function of strongly homologous gene; enzyme.
  
  
 0.706
CCH86208.1
Homologs of previously reported genes of unknown function.
  
  
 0.636
CCH88450.1
Homologs of previously reported genes of unknown function.
  
  
 0.636
CCH88480.1
Homologs of previously reported genes of unknown function.
  
  
 0.636
CCH86250.1
Multicopper oxidase, type 3; Function of strongly homologous gene; enzyme.
     
 0.632
nadE-2
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.626
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.