STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copC-2Copper resistance protein CopC; Function of strongly homologous gene; transporter. (591 aa)    
Predicted Functional Partners:
CCH87390.1
Homologs of previously reported genes of unknown function.
 
  
 0.995
CCH86734.1
Homologs of previously reported genes of unknown function.
 
  
 0.987
CCH87391.1
Homologs of previously reported genes of unknown function.
 
     0.860
CCH85529.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.776
CCH87546.1
Dyp-type peroxidase; Function of strongly homologous gene; enzyme.
  
  
 0.627
CCH86208.1
Homologs of previously reported genes of unknown function.
  
    0.620
CCH88450.1
Homologs of previously reported genes of unknown function.
  
    0.620
CCH88480.1
Homologs of previously reported genes of unknown function.
  
    0.620
CCH87393.1
Transcriptional regulator, ArsR family; Function of strongly homologous gene; regulator.
     
 0.599
CCH86250.1
Multicopper oxidase, type 3; Function of strongly homologous gene; enzyme.
     
 0.591
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.