Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH87411.1Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator. (912 aa)    
Predicted Functional Partners:
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
   
 0.771
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.644
CCH89435.1
Two-component sensor histidine kinase; Function of strongly homologous gene; enzyme.
   
 0.617
CCH86505.1
Homologs of previously reported genes of unknown function.
  
     0.536
CCH87412.1
Putative translation initiation inhibitor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.
 
     0.531
CCH89391.1
Homologs of previously reported genes of unknown function.
 
 
 0.511
CCH87455.1
Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator.
 
 
0.498
CCH85700.1
Two component signal transducing histidine kinase; Function of strongly homologous gene; enzyme.
    
 0.460
CCH87733.1
Sensor kinase, two-component system; Function of strongly homologous gene; enzyme.
    
 0.460
mtrB
Two component sensor histidine kinase mtrB; Function of strongly homologous gene; enzyme.
    
 0.460
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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