STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87453.1Alpha/beta hydrolase; Function of strongly homologous gene; enzyme. (257 aa)    
Predicted Functional Partners:
CCH87808.1
Putative esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.772
CCH87454.1
Homologs of previously reported genes of unknown function.
       0.718
CCH90518.1
Homologs of previously reported genes of unknown function.
  
     0.678
CCH89393.1
NAD dependent epimerase/dehydratase (fragment); Function of strongly homologous gene; enzyme.
  
     0.672
CCH85818.1
NAD-dependent epimerase/dehydratase; Function of strongly homologous gene; enzyme.
  
     0.630
dehH
Haloacetate dehalogenase H-1; Function of strongly homologous gene; enzyme.
 
     0.556
CCH86662.1
Homologs of previously reported genes of unknown function.
 
     0.473
CCH90729.1
Homologs of previously reported genes of unknown function.
  
     0.450
CCH87477.1
Homologs of previously reported genes of unknown function.
  
  
  0.442
CCH89476.1
NAD-dependent epimerase/dehydratase; Function of strongly homologous gene; enzyme.
  
    0.433
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.