STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87454.1Homologs of previously reported genes of unknown function. (123 aa)    
Predicted Functional Partners:
CCH87453.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
       0.718
CCH87780.1
Antibiotic biosynthesis monooxygenase; Function of strongly homologous gene; enzyme.
 
    0.499
CCH86243.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
  
 0.480
CCH87783.1
Phosphoenolpyruvate-utilising enzyme, mobile region; Function of strongly homologous gene; enzyme.
  
   
 0.472
dehH
Haloacetate dehalogenase H-1; Function of strongly homologous gene; enzyme.
       0.447
CCH87819.1
Beta-lactamase domain protein; Function of strongly homologous gene; cell process.
  
     0.435
CCH85510.1
Transcriptional regulator, GntR-family; Function of strongly homologous gene; regulator.
  
  
 0.419
CCH88182.1
Inosine-uridine preferring nucleoside hydrolase; Function of strongly homologous gene; enzyme.
  
     0.410
CCH87626.1
Inosine/uridine-preferring nucleoside hydrolase; Function of strongly homologous gene; enzyme.
  
     0.406
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.