STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87462.1Putative membrane protein of unknown function; No homology to any previously reported sequences. (120 aa)    
Predicted Functional Partners:
CCH87461.1
Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.876
CCH87460.1
Homologs of previously reported genes of unknown function.
       0.604
CCH86243.1
Transcriptional regulator, XRE family; Function of strongly homologous gene; regulator.
  
 0.480
CCH89464.1
Putative AAA+ family ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.471
CCH90929.1
Conserved membrane protein of unknown function, putative Cupin 2 conserved barrel domain; Homologs of previously reported genes of unknown function.
 
     0.467
CCH87598.1
Homologs of previously reported genes of unknown function.
 
    0.455
CCH87661.1
Truncated hemoglobins-like protein.
 
    0.450
CCH89283.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.440
CCH89005.1
Homologs of previously reported genes of unknown function.
 
     0.423
CCH85510.1
Transcriptional regulator, GntR-family; Function of strongly homologous gene; regulator.
  
  
 0.419
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.