STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87474.1Homologs of previously reported genes of unknown function. (217 aa)    
Predicted Functional Partners:
CCH87736.1
Membrane protein of unknown function, putative kinase domain; No homology to any previously reported sequences.
  
     0.755
CCH89458.1
Membrane protein of unknown function; No homology to any previously reported sequences.
  
     0.697
CCH88486.1
Metallophosphoesterase; Function of strongly homologous gene; enzyme.
  
     0.676
CCH87738.1
Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.651
CCH85723.1
Transcriptional regulator, putative ATPase, winged helix family; Function of strongly homologous gene; regulator.
  
     0.594
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.589
CCH87475.1
Homologs of previously reported genes of unknown function.
       0.554
CCH88706.1
Homologs of previously reported genes of unknown function.
  
     0.552
CCH89361.1
Homologs of previously reported genes of unknown function.
  
     0.551
CCH86001.1
Homologs of previously reported genes of unknown function.
  
     0.544
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.