STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aroGPhospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (413 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
  
 0.977
aroF
Phospho-2-dehydro-3-deoxyheptonate aldolase; Function of strongly homologous gene; enzyme; Belongs to the class-II DAHP synthase family.
     
 0.914
CCH85999.1
Prephenate dehydrogenase; Function of strongly homologous gene; enzyme.
  
  
 0.782
pheA
Prephenate dehydratase; Function of strongly homologous gene; enzyme.
  
  
 0.738
aroE-2
Shikimate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the shikimate dehydrogenase family.
     
 0.637
CCH90223.1
Monofunctional chorismate mutase; Function of strongly homologous gene; enzyme.
 
  
 0.627
ispU
Undecaprenyl pyrophosphate synthetase 1; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
      0.582
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
  
 0.529
CCH87478.1
Transcriptional regulator, DeoR family; Function of strongly homologous gene; regulator.
       0.507
pab
Para-aminobenzoate synthase; Function of strongly homologous gene; enzyme.
 
  
 0.494
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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