STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87484.1Putative transcriptional regulator, PucR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (423 aa)    
Predicted Functional Partners:
CCH87483.1
Flavin-containing monooxygenase; Function of strongly homologous gene; enzyme.
 
     0.812
CCH89774.1
Cell envelope-related function transcriptional attenuator common domain; Function of strongly homologous gene; regulator.
   
    0.796
CCH87481.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.755
CCH90635.1
MarR family transcriptional regulator.
   
    0.651
CCH87482.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
 
     0.635
CCH86023.1
Transcriptional regulator, HxlR family; Function of strongly homologous gene; regulator.
   
    0.582
CCH87486.1
ATPase-like protein.
  
    0.571
CCH87485.1
Homologs of previously reported genes of unknown function.
       0.565
cobB-2
Sir2-family regulator protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.552
CCH88999.1
Silent information regulator protein Sir2; Function of homologous gene experimentally demonstrated in an other organism; regulator.
   
    0.552
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.