STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87514.1Oxidoreductase FAD-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the globin family. (415 aa)    
Predicted Functional Partners:
CCH88314.1
Dimethylglycine oxidase; Function of strongly homologous gene; enzyme; Belongs to the GcvT family.
 
 
 0.809
CCH87183.1
Homologs of previously reported genes of unknown function.
    
 0.736
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
 
 
 0.728
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
  
 
 0.692
CCH85754.1
Methyl-accepting chemotaxis transducer/sensory box protein; Function of strongly homologous gene; receptor.
    
 0.668
CCH89234.1
Methyl-accepting chemotaxis transducer/sensory box protein; Function of strongly homologous gene; cell process.
    
 0.668
CCH86574.1
Transcriptional regulator, Rrf2 family; Function of strongly homologous gene; regulator.
     
 0.667
CCH87488.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
  
 
 0.660
CCH88323.1
Ferredoxin reductase; Function of strongly homologous gene; enzyme.
  
  
 0.658
CCH88416.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function of strongly homologous gene; enzyme.
  
  
 0.658
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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